MECHANISM OF OROTIDINE-5'-MONOPHOSPHATE DECARBOXYLASE

San Francisco State University, San Francisco CA

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Abstract

The enzyme orotidine-5'-monophosphate decarboxylase (ODCase) is involved in the biosynthesis of nucleic acid building blocks and thus represents a potential target for development of anti-tumor drugs. Developing a clear understanding of the fundamental mechanisms of key enzymes has already proven an important contribution to the discovery of new drug therapies. The goal of the proposed research is to understand how the enzyme catalyzes the conversion of the substrate orotidine-5'- monophosphate (OMP) to product uridine-5'-monophosphate (UMP) and to probe the positioning of amino acid residues in the active site of the enzyme. Substrate analogs will be synthesized and studied. NMR spectroscopy will be used to investigate substrate analog-enzyme complexes to probe the structural change of the substrate upon binding in the active site. Chemical method and site-directed mutagenesis will be used to determine the role of active-site residues. The proposed work will be carried out in collaboration with Professor Susan M. Miller at the Department of Pharmaceutical Chemistry, University of California at San Francisco.